<?xml version="1.0" encoding="UTF-8"?>
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<glycomedb_document path_to_root="..">
	<header>
		<title>Database search options</title>
		<description></description>
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		<keywords>carbohydrate,carbohydrate structures</keywords>
		<author>Rene Ranzinger</author>
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	<menu>
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			open="false"
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			text="Home" url="../About.action" >
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			text="Database" url="../showMenu.action?major=database" >
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				text="Search by database ID" url="../database/searchByDatabase.action" >
			</entry>
			<entry 
				open="false"
				select="false"
				text="Exact structure search" url="../database/searchStructure.action" >
			</entry>
			<entry 
				open="false"
				select="false"
				text="Substructure search" url="../database/searchSubStructure.action" >
			</entry>
			<entry 
				open="false"
				select="false"
				text="Similarity search" url="../database/searchSimilarStructure.action" >
			</entry>
			<entry 
				open="false"
				select="false"
				text="MCS search" url="../database/searchMCS.action" >
			</entry>
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				open="false"
				select="false"
				text="Search by species" url="../database/searchBySpecies.action" >
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	</menu>


<body title="Structure information for structure 1,857">
	<structure_information id="1857" flags="101101" back_text="New search" back_url="" 
		image_width="290" image_height="134" image_type="cfg">
 		<species count="9" remote="no">
			<taxon ncbi="9913" name="Bos taurus">
				<entry database="carbbank" id="7021"/>
				<entry database="eurocarbdb(ebi)" id="759"/>
			</taxon>
			<taxon ncbi="9031" name="Gallus gallus">
				<entry database="carbbank" id="7021"/>
				<entry database="carbbank" id="26076"/>
				<entry database="carbbank" id="33542"/>
				<entry database="eurocarbdb(ebi)" id="759"/>
				<entry database="glycosciences.de" id="2362"/>
				<entry database="glycosciences.de" id="3467"/>
			</taxon>
			<taxon ncbi="9606" name="Homo sapiens">
				<entry database="carbbank" id="4334"/>
				<entry database="carbbank" id="4624"/>
				<entry database="carbbank" id="7578"/>
				<entry database="carbbank" id="43244"/>
				<entry database="carbbank" id="45025"/>
				<entry database="carbbank" id="46605"/>
				<entry database="eurocarbdb(ebi)" id="759"/>
				<entry database="glycosciences.de" id="2362"/>
				<entry database="glycosciences.de" id="16165"/>
			</taxon>
			<taxon ncbi="63221" name="Homo sapiens neanderthalensis">
				<entry database="eurocarbdb(ebi)" id="759"/>
			</taxon>
			<taxon ncbi="10035" name="Mesocricetus">
				<entry database="eurocarbdb(ebi)" id="759"/>
			</taxon>
			<taxon ncbi="10088" name="Mus">
				<entry database="eurocarbdb(ebi)" id="759"/>
			</taxon>
			<taxon ncbi="10090" name="Mus musculus">
				<entry database="carbbank" id="7577"/>
				<entry database="eurocarbdb(ebi)" id="759"/>
				<entry database="glycosciences.de" id="2362"/>
			</taxon>
			<taxon ncbi="118702" name="Nicotiana longiflora">
				<entry database="eurocarbdb(ebi)" id="759"/>
			</taxon>
			<taxon ncbi="10239" name="Viruses">
				<entry database="carbbank" id="7581"/>
				<entry database="eurocarbdb(ebi)" id="759"/>
				<entry database="glycosciences.de" id="2362"/>
			</taxon>
		</species>
 		<aglycon count="8" remote="no">
			<aglyca name="Asn" reducing="yes">
				<entry database="carbbank" id="1277"/>
				<entry database="carbbank" id="4334"/>
				<entry database="carbbank" id="4624"/>
				<entry database="carbbank" id="5054"/>
				<entry database="carbbank" id="6260"/>
				<entry database="carbbank" id="7021"/>
				<entry database="carbbank" id="7574"/>
				<entry database="carbbank" id="7576"/>
				<entry database="carbbank" id="7577"/>
				<entry database="carbbank" id="7578"/>
				<entry database="carbbank" id="7581"/>
				<entry database="carbbank" id="7582"/>
				<entry database="carbbank" id="8108"/>
				<entry database="carbbank" id="12769"/>
				<entry database="carbbank" id="12789"/>
				<entry database="carbbank" id="26076"/>
				<entry database="carbbank" id="30027"/>
				<entry database="carbbank" id="31284"/>
				<entry database="carbbank" id="34934"/>
				<entry database="carbbank" id="35053"/>
				<entry database="carbbank" id="35728"/>
				<entry database="carbbank" id="38433"/>
				<entry database="carbbank" id="38550"/>
				<entry database="carbbank" id="43244"/>
				<entry database="carbbank" id="43555"/>
				<entry database="carbbank" id="44538"/>
				<entry database="carbbank" id="45025"/>
				<entry database="glycosciences.de" id="2362"/>
				<entry database="glycosciences.de" id="2418"/>
				<entry database="glycosciences.de" id="3416"/>
				<entry database="glycosciences.de" id="16165"/>
				<entry database="kegg" id="G00015"/>
			</aglyca>
			<aglyca name="[Bolton-Hunter reagent]" reducing="yes">
				<entry database="carbbank" id="33542"/>
				<entry database="glycosciences.de" id="3467"/>
			</aglyca>
			<aglyca name="[Glycyl-FITC]" reducing="yes">
				<entry database="carbbank" id="29255"/>
				<entry database="glycosciences.de" id="3570"/>
			</aglyca>
			<aglyca name="[7-amino-4-methyl-2h-1-benzopyran-2-one]" reducing="yes">
				<entry database="carbbank" id="14719"/>
				<entry database="glycosciences.de" id="5712"/>
			</aglyca>
			<aglyca name="2-aminopyridine" reducing="yes">
				<entry database="carbbank" id="34720"/>
				<entry database="glycosciences.de" id="6676"/>
			</aglyca>
			<aglyca name="[BSA]" reducing="yes">
				<entry database="carbbank" id="29847"/>
			</aglyca>
			<aglyca name="[7-amino-4-methylcoumarin]" reducing="yes">
				<entry database="carbbank" id="46605"/>
			</aglyca>
			<aglyca name="#Sp8" reducing="yes">
				<entry database="cfg" id="carbSynthe_0871_D000"/>
			</aglyca>
		</aglycon>
		<remote count="48">
			<entry database="carbbank" id="1277"/>
			<entry database="carbbank" id="4334"/>
			<entry database="carbbank" id="4624"/>
			<entry database="carbbank" id="5054"/>
			<entry database="carbbank" id="6260"/>
			<entry database="carbbank" id="7021"/>
			<entry database="carbbank" id="7574"/>
			<entry database="carbbank" id="7576"/>
			<entry database="carbbank" id="7577"/>
			<entry database="carbbank" id="7578"/>
			<entry database="carbbank" id="7581"/>
			<entry database="carbbank" id="7582"/>
			<entry database="carbbank" id="8108"/>
			<entry database="carbbank" id="12769"/>
			<entry database="carbbank" id="12789"/>
			<entry database="carbbank" id="14719"/>
			<entry database="carbbank" id="26076"/>
			<entry database="carbbank" id="29255"/>
			<entry database="carbbank" id="29847"/>
			<entry database="carbbank" id="30027"/>
			<entry database="carbbank" id="31284"/>
			<entry database="carbbank" id="33542"/>
			<entry database="carbbank" id="34720"/>
			<entry database="carbbank" id="34934"/>
			<entry database="carbbank" id="35053"/>
			<entry database="carbbank" id="35728"/>
			<entry database="carbbank" id="38433"/>
			<entry database="carbbank" id="38550"/>
			<entry database="carbbank" id="43244"/>
			<entry database="carbbank" id="43555"/>
			<entry database="carbbank" id="44538"/>
			<entry database="carbbank" id="45025"/>
			<entry database="carbbank" id="46605"/>
			<entry database="cfg" id="carbSynthe_0871_D000"/>
			<entry database="eurocarbdb(ebi)" id="759"/>
			<entry database="glycosciences.de" id="2362"/>
			<entry database="glycosciences.de" id="2418"/>
			<entry database="glycosciences.de" id="3416"/>
			<entry database="glycosciences.de" id="3467"/>
			<entry database="glycosciences.de" id="3570"/>
			<entry database="glycosciences.de" id="5712"/>
			<entry database="glycosciences.de" id="6676"/>
			<entry database="glycosciences.de" id="16165"/>
			<entry database="glycosciences.de" id="23044"/>
			<entry database="kegg" id="G00015"/>
			<entry database="pdb" id="1zag"/>
			<entry database="pdb" id="2dts"/>
			<entry database="pdb" id="2vuz"/>
		</remote>
		<expire count="4">
			<entry database="eurocarbdb(nibrt)" id="759" date="2009-11-09"/>
			<entry database="glyaffinity" id="428" date="2009-07-17"/>
			<entry database="glyaffinity" id="1216" date="2009-09-16"/>
			<entry database="glycobase(dublin)" id="501" date="2009-11-09"/>
		</expire>
		<deleted count="0">
		</deleted>
		<motifs count="1">
			<motif id="70" name="N-Glycan core basic" class="N-Glycan"/>
		</motifs>
		<condenced>RES
1b:b-dglc-HEX-1:5
2s:n-acetyl
3b:b-dglc-HEX-1:5
4s:n-acetyl
5b:b-dman-HEX-1:5
6b:a-dman-HEX-1:5
7b:b-dglc-HEX-1:5
8s:n-acetyl
9b:a-dman-HEX-1:5
10b:b-dglc-HEX-1:5
11s:n-acetyl
LIN
1:1d(2+1)2n
2:1o(4+1)3d
3:3d(2+1)4n
4:3o(4+1)5d
5:5o(3+1)6d
6:6o(2+1)7d
7:7d(2+1)8n
8:5o(6+1)9d
9:9o(2+1)10d
10:10d(2+1)11n
</condenced>
		<glycoct><![CDATA[<?xml version="1.0" encoding="UTF-8"?>
<sugar version="1.0">
  <residues>
    <basetype id="1" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
      <stemtype id="1" type="dglc" />
    </basetype>
    <substituent id="2" name="n-acetyl" />
    <basetype id="3" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
      <stemtype id="1" type="dglc" />
    </basetype>
    <substituent id="4" name="n-acetyl" />
    <basetype id="5" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dman-HEX-1:5">
      <stemtype id="1" type="dman" />
    </basetype>
    <basetype id="6" anomer="a" superclass="hex" ringStart="1" ringEnd="5" name="a-dman-HEX-1:5">
      <stemtype id="1" type="dman" />
    </basetype>
    <basetype id="7" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
      <stemtype id="1" type="dglc" />
    </basetype>
    <substituent id="8" name="n-acetyl" />
    <basetype id="9" anomer="a" superclass="hex" ringStart="1" ringEnd="5" name="a-dman-HEX-1:5">
      <stemtype id="1" type="dman" />
    </basetype>
    <basetype id="10" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
      <stemtype id="1" type="dglc" />
    </basetype>
    <substituent id="11" name="n-acetyl" />
  </residues>
  <linkages>
    <connection id="1" parent="1" child="2">
      <linkage id="1" parentType="d" childType="n">
        <parent pos="2" />
        <child pos="1" />
      </linkage>
    </connection>
    <connection id="2" parent="1" child="3">
      <linkage id="2" parentType="o" childType="d">
        <parent pos="4" />
        <child pos="1" />
      </linkage>
    </connection>
    <connection id="3" parent="3" child="4">
      <linkage id="3" parentType="d" childType="n">
        <parent pos="2" />
        <child pos="1" />
      </linkage>
    </connection>
    <connection id="4" parent="3" child="5">
      <linkage id="4" parentType="o" childType="d">
        <parent pos="4" />
        <child pos="1" />
      </linkage>
    </connection>
    <connection id="5" parent="5" child="6">
      <linkage id="5" parentType="o" childType="d">
        <parent pos="3" />
        <child pos="1" />
      </linkage>
    </connection>
    <connection id="6" parent="6" child="7">
      <linkage id="6" parentType="o" childType="d">
        <parent pos="2" />
        <child pos="1" />
      </linkage>
    </connection>
    <connection id="7" parent="7" child="8">
      <linkage id="7" parentType="d" childType="n">
        <parent pos="2" />
        <child pos="1" />
      </linkage>
    </connection>
    <connection id="8" parent="5" child="9">
      <linkage id="8" parentType="o" childType="d">
        <parent pos="6" />
        <child pos="1" />
      </linkage>
    </connection>
    <connection id="9" parent="9" child="10">
      <linkage id="9" parentType="o" childType="d">
        <parent pos="2" />
        <child pos="1" />
      </linkage>
    </connection>
    <connection id="10" parent="10" child="11">
      <linkage id="10" parentType="d" childType="n">
        <parent pos="2" />
        <child pos="1" />
      </linkage>
    </connection>
  </linkages>
</sugar>

]]></glycoct>
		<glyde><![CDATA[<?xml version="1.0" encoding="UTF-8"?>
<GlydeII>
  <molecule subtype="glycan" id="From_GlycoCT_Translation">
    <residue subtype="base_type" partid="1" ref="http://www.monosaccharideDB.org/GLYDE-II.jsp?G=b-dglc-HEX-1:5" />
    <residue subtype="substituent" partid="2" ref="http://www.monosaccharideDB.org/GLYDE-II.jsp?G=n-acetyl" />
    <residue subtype="base_type" partid="3" ref="http://www.monosaccharideDB.org/GLYDE-II.jsp?G=b-dglc-HEX-1:5" />
    <residue subtype="substituent" partid="4" ref="http://www.monosaccharideDB.org/GLYDE-II.jsp?G=n-acetyl" />
    <residue subtype="base_type" partid="5" ref="http://www.monosaccharideDB.org/GLYDE-II.jsp?G=b-dman-HEX-1:5" />
    <residue subtype="base_type" partid="6" ref="http://www.monosaccharideDB.org/GLYDE-II.jsp?G=a-dman-HEX-1:5" />
    <residue subtype="base_type" partid="7" ref="http://www.monosaccharideDB.org/GLYDE-II.jsp?G=b-dglc-HEX-1:5" />
    <residue subtype="substituent" partid="8" ref="http://www.monosaccharideDB.org/GLYDE-II.jsp?G=n-acetyl" />
    <residue subtype="base_type" partid="9" ref="http://www.monosaccharideDB.org/GLYDE-II.jsp?G=a-dman-HEX-1:5" />
    <residue subtype="base_type" partid="10" ref="http://www.monosaccharideDB.org/GLYDE-II.jsp?G=b-dglc-HEX-1:5" />
    <residue subtype="substituent" partid="11" ref="http://www.monosaccharideDB.org/GLYDE-II.jsp?G=n-acetyl" />
    <residue_link from="2" to="1">
      <atom_link from="N1H" to="C2" to_replace="O2" bond_order="1" />
    </residue_link>
    <residue_link from="3" to="1">
      <atom_link from="C1" to="O4" from_replace="O1" bond_order="1" />
    </residue_link>
    <residue_link from="4" to="3">
      <atom_link from="N1H" to="C2" to_replace="O2" bond_order="1" />
    </residue_link>
    <residue_link from="5" to="3">
      <atom_link from="C1" to="O4" from_replace="O1" bond_order="1" />
    </residue_link>
    <residue_link from="6" to="5">
      <atom_link from="C1" to="O3" from_replace="O1" bond_order="1" />
    </residue_link>
    <residue_link from="7" to="6">
      <atom_link from="C1" to="O2" from_replace="O1" bond_order="1" />
    </residue_link>
    <residue_link from="8" to="7">
      <atom_link from="N1H" to="C2" to_replace="O2" bond_order="1" />
    </residue_link>
    <residue_link from="9" to="5">
      <atom_link from="C1" to="O6" from_replace="O1" bond_order="1" />
    </residue_link>
    <residue_link from="10" to="9">
      <atom_link from="C1" to="O2" from_replace="O1" bond_order="1" />
    </residue_link>
    <residue_link from="11" to="10">
      <atom_link from="N1H" to="C2" to_replace="O2" bond_order="1" />
    </residue_link>
  </molecule>
</GlydeII>

]]></glyde>
		<encodings>
			<encoding name="GlycoCT{condensed}"/>
			<encoding name="GlycoCT{XML}"/>
			<encoding name="GlydeII"/>
		</encodings>
	</structure_information>
</body>
	<footer/>
</glycomedb_document>


