<?xml version="1.0" encoding="UTF-8"?>
<?xml-stylesheet type="text/xsl" href="../xsl/database/show_single_result.1.0.1.xsl" ?>
<glycomedb_document path_to_root="..">
	<header>
		<title>Database search options</title>
		<description></description>
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		<keywords>carbohydrate,carbohydrate structures</keywords>
		<author>Rene Ranzinger</author>
	</header>
	<menu>
		<entry 
			open="false"
			select="false"
			text="Home" url="../About.action" >
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		<entry 
			open="true"
			select="true"
			text="Database" url="../showMenu.action?major=database" >
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				open="false"
				select="false"
				text="Search by database ID" url="../database/searchByDatabase.action" >
			</entry>
			<entry 
				open="false"
				select="false"
				text="Exact structure search" url="../database/searchStructure.action" >
			</entry>
			<entry 
				open="false"
				select="false"
				text="Substructure search" url="../database/searchSubStructure.action" >
			</entry>
			<entry 
				open="false"
				select="false"
				text="Similarity search" url="../database/searchSimilarStructure.action" >
			</entry>
			<entry 
				open="false"
				select="false"
				text="MCS search" url="../database/searchMCS.action" >
			</entry>
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				open="false"
				select="false"
				text="Search by species" url="../database/searchBySpecies.action" >
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			text="Translation" url="../translation/Translation.action" >
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<body title="Structure information for structure 2,350">
	<structure_information id="2350" flags="101101" back_text="New search" back_url="" 
		image_width="290" image_height="134" image_type="cfg">
 		<species count="7" remote="no">
			<taxon ncbi="9913" name="Bos taurus">
				<entry database="carbbank" id="44839"/>
				<entry database="eurocarbdb(ebi)" id="3004"/>
			</taxon>
			<taxon ncbi="9685" name="Felis catus">
				<entry database="carbbank" id="44839"/>
				<entry database="eurocarbdb(ebi)" id="3004"/>
			</taxon>
			<taxon ncbi="9606" name="Homo sapiens">
				<entry database="carbbank" id="1171"/>
				<entry database="carbbank" id="1172"/>
				<entry database="carbbank" id="17004"/>
				<entry database="carbbank" id="17014"/>
				<entry database="carbbank" id="21515"/>
				<entry database="carbbank" id="44839"/>
				<entry database="eurocarbdb(ebi)" id="3004"/>
				<entry database="glycosciences.de" id="3038"/>
			</taxon>
			<taxon ncbi="10090" name="Mus musculus">
				<entry database="carbbank" id="14861"/>
				<entry database="carbbank" id="15601"/>
				<entry database="carbbank" id="25259"/>
				<entry database="carbbank" id="32068"/>
				<entry database="carbbank" id="36490"/>
				<entry database="carbbank" id="47173"/>
				<entry database="carbbank" id="50162"/>
				<entry database="eurocarbdb(ebi)" id="3004"/>
				<entry database="glycosciences.de" id="3038"/>
			</taxon>
			<taxon ncbi="9986" name="Oryctolagus cuniculus">
				<entry database="carbbank" id="44839"/>
				<entry database="eurocarbdb(ebi)" id="3004"/>
				<entry database="glycosciences.de" id="3038"/>
			</taxon>
			<taxon ncbi="10114" name="Rattus">
				<entry database="carbbank" id="36573"/>
				<entry database="eurocarbdb(ebi)" id="3004"/>
				<entry database="glycosciences.de" id="3038"/>
			</taxon>
			<taxon ncbi="8355" name="Xenopus laevis">
				<entry database="carbbank" id="21370"/>
				<entry database="carbbank" id="46841"/>
				<entry database="eurocarbdb(ebi)" id="3004"/>
			</taxon>
		</species>
 		<aglycon count="2" remote="no">
			<aglyca name="Ceramide" reducing="yes">
				<entry database="carbbank" id="1171"/>
				<entry database="carbbank" id="1172"/>
				<entry database="carbbank" id="14861"/>
				<entry database="carbbank" id="15601"/>
				<entry database="carbbank" id="17004"/>
				<entry database="carbbank" id="17014"/>
				<entry database="carbbank" id="21370"/>
				<entry database="carbbank" id="21515"/>
				<entry database="carbbank" id="21982"/>
				<entry database="carbbank" id="25259"/>
				<entry database="carbbank" id="32068"/>
				<entry database="carbbank" id="36490"/>
				<entry database="carbbank" id="36573"/>
				<entry database="carbbank" id="44839"/>
				<entry database="carbbank" id="45479"/>
				<entry database="carbbank" id="46841"/>
				<entry database="carbbank" id="47173"/>
				<entry database="carbbank" id="50162"/>
				<entry database="glycosciences.de" id="3038"/>
			</aglyca>
			<aglyca name="Cer" reducing="yes">
				<entry database="kegg" id="G00167"/>
			</aglyca>
		</aglycon>
		<remote count="21">
			<entry database="carbbank" id="1171"/>
			<entry database="carbbank" id="1172"/>
			<entry database="carbbank" id="14861"/>
			<entry database="carbbank" id="15601"/>
			<entry database="carbbank" id="17004"/>
			<entry database="carbbank" id="17014"/>
			<entry database="carbbank" id="21370"/>
			<entry database="carbbank" id="21515"/>
			<entry database="carbbank" id="21982"/>
			<entry database="carbbank" id="25259"/>
			<entry database="carbbank" id="32068"/>
			<entry database="carbbank" id="36490"/>
			<entry database="carbbank" id="36573"/>
			<entry database="carbbank" id="44839"/>
			<entry database="carbbank" id="45479"/>
			<entry database="carbbank" id="46841"/>
			<entry database="carbbank" id="47173"/>
			<entry database="carbbank" id="50162"/>
			<entry database="eurocarbdb(ebi)" id="3004"/>
			<entry database="glycosciences.de" id="3038"/>
			<entry database="kegg" id="G00167"/>
		</remote>
		<expire count="1">
			<entry database="eurocarbdb(nibrt)" id="3004" date="2009-11-09"/>
		</expire>
		<deleted count="0">
		</deleted>
		<motifs count="1">
			<motif id="502" name="Glycosphingolipid Ganglio series" class="Glycosphingolipid"/>
		</motifs>
		<condenced>RES
1b:b-dglc-HEX-1:5
2b:b-dgal-HEX-1:5
3b:b-dgal-HEX-1:5
4s:n-acetyl
5b:b-dgal-HEX-1:5
6b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d
7s:n-acetyl
8b:b-dgal-HEX-1:5
9s:n-acetyl
LIN
1:1o(4+1)2d
2:2o(4+1)3d
3:3d(2+1)4n
4:3o(3+1)5d
5:5o(3+2)6d
6:6d(5+1)7n
7:5o(4+1)8d
8:8d(2+1)9n
</condenced>
		<glycoct><![CDATA[<?xml version="1.0" encoding="UTF-8"?>
<sugar version="1.0">
  <residues>
    <basetype id="1" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
      <stemtype id="1" type="dglc" />
    </basetype>
    <basetype id="2" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dgal-HEX-1:5">
      <stemtype id="1" type="dgal" />
    </basetype>
    <basetype id="3" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dgal-HEX-1:5">
      <stemtype id="1" type="dgal" />
    </basetype>
    <substituent id="4" name="n-acetyl" />
    <basetype id="5" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dgal-HEX-1:5">
      <stemtype id="1" type="dgal" />
    </basetype>
    <basetype id="6" anomer="a" superclass="non" ringStart="2" ringEnd="6" name="a-dgro-dgal-NON-2:6|1:a|2:keto|3:d">
      <stemtype id="1" type="dgro" />
      <stemtype id="2" type="dgal" />
      <modification type="a" pos_one="1" />
      <modification type="keto" pos_one="2" />
      <modification type="d" pos_one="3" />
    </basetype>
    <substituent id="7" name="n-acetyl" />
    <basetype id="8" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dgal-HEX-1:5">
      <stemtype id="1" type="dgal" />
    </basetype>
    <substituent id="9" name="n-acetyl" />
  </residues>
  <linkages>
    <connection id="1" parent="1" child="2">
      <linkage id="1" parentType="o" childType="d">
        <parent pos="4" />
        <child pos="1" />
      </linkage>
    </connection>
    <connection id="2" parent="2" child="3">
      <linkage id="2" parentType="o" childType="d">
        <parent pos="4" />
        <child pos="1" />
      </linkage>
    </connection>
    <connection id="3" parent="3" child="4">
      <linkage id="3" parentType="d" childType="n">
        <parent pos="2" />
        <child pos="1" />
      </linkage>
    </connection>
    <connection id="4" parent="3" child="5">
      <linkage id="4" parentType="o" childType="d">
        <parent pos="3" />
        <child pos="1" />
      </linkage>
    </connection>
    <connection id="5" parent="5" child="6">
      <linkage id="5" parentType="o" childType="d">
        <parent pos="3" />
        <child pos="2" />
      </linkage>
    </connection>
    <connection id="6" parent="6" child="7">
      <linkage id="6" parentType="d" childType="n">
        <parent pos="5" />
        <child pos="1" />
      </linkage>
    </connection>
    <connection id="7" parent="5" child="8">
      <linkage id="7" parentType="o" childType="d">
        <parent pos="4" />
        <child pos="1" />
      </linkage>
    </connection>
    <connection id="8" parent="8" child="9">
      <linkage id="8" parentType="d" childType="n">
        <parent pos="2" />
        <child pos="1" />
      </linkage>
    </connection>
  </linkages>
</sugar>

]]></glycoct>
		<glyde><![CDATA[<?xml version="1.0" encoding="UTF-8"?>
<GlydeII>
  <molecule subtype="glycan" id="From_GlycoCT_Translation">
    <residue subtype="base_type" partid="1" ref="http://www.monosaccharideDB.org/GLYDE-II.jsp?G=b-dglc-HEX-1:5" />
    <residue subtype="base_type" partid="2" ref="http://www.monosaccharideDB.org/GLYDE-II.jsp?G=b-dgal-HEX-1:5" />
    <residue subtype="base_type" partid="3" ref="http://www.monosaccharideDB.org/GLYDE-II.jsp?G=b-dgal-HEX-1:5" />
    <residue subtype="substituent" partid="4" ref="http://www.monosaccharideDB.org/GLYDE-II.jsp?G=n-acetyl" />
    <residue subtype="base_type" partid="5" ref="http://www.monosaccharideDB.org/GLYDE-II.jsp?G=b-dgal-HEX-1:5" />
    <residue subtype="base_type" partid="6" ref="http://www.monosaccharideDB.org/GLYDE-II.jsp?G=a-dgro-dgal-NON-2:6|1:a|2:keto|3:d" />
    <residue subtype="substituent" partid="7" ref="http://www.monosaccharideDB.org/GLYDE-II.jsp?G=n-acetyl" />
    <residue subtype="base_type" partid="8" ref="http://www.monosaccharideDB.org/GLYDE-II.jsp?G=b-dgal-HEX-1:5" />
    <residue subtype="substituent" partid="9" ref="http://www.monosaccharideDB.org/GLYDE-II.jsp?G=n-acetyl" />
    <residue_link from="2" to="1">
      <atom_link from="C1" to="O4" from_replace="O1" bond_order="1" />
    </residue_link>
    <residue_link from="3" to="2">
      <atom_link from="C1" to="O4" from_replace="O1" bond_order="1" />
    </residue_link>
    <residue_link from="4" to="3">
      <atom_link from="N1H" to="C2" to_replace="O2" bond_order="1" />
    </residue_link>
    <residue_link from="5" to="3">
      <atom_link from="C1" to="O3" from_replace="O1" bond_order="1" />
    </residue_link>
    <residue_link from="6" to="5">
      <atom_link from="C2" to="O3" from_replace="O2" bond_order="1" />
    </residue_link>
    <residue_link from="7" to="6">
      <atom_link from="N1H" to="C5" to_replace="O5" bond_order="1" />
    </residue_link>
    <residue_link from="8" to="5">
      <atom_link from="C1" to="O4" from_replace="O1" bond_order="1" />
    </residue_link>
    <residue_link from="9" to="8">
      <atom_link from="N1H" to="C2" to_replace="O2" bond_order="1" />
    </residue_link>
  </molecule>
</GlydeII>

]]></glyde>
		<encodings>
			<encoding name="GlycoCT{condensed}"/>
			<encoding name="GlycoCT{XML}"/>
			<encoding name="GlydeII"/>
		</encodings>
	</structure_information>
</body>
	<footer/>
</glycomedb_document>


