<?xml version="1.0" encoding="UTF-8"?>
<?xml-stylesheet type="text/xsl" href="../xsl/database/show_single_result.1.0.1.xsl" ?>
<glycomedb_document path_to_root="..">
	<header>
		<title>Database search options</title>
		<description></description>
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			<file>../js/glycomedb.js</file>
		</javascript>
		<stylesheet>
			<file>../css/glycomedb.css</file>
		</stylesheet>
		<keywords>carbohydrate,carbohydrate structures</keywords>
		<author>Rene Ranzinger</author>
	</header>
	<menu>
		<entry 
			open="false"
			select="false"
			text="Home" url="../About.action" >
		</entry>
		<entry 
			open="true"
			select="true"
			text="Database" url="../showMenu.action?major=database" >
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				open="false"
				select="false"
				text="Search by database ID" url="../database/searchByDatabase.action" >
			</entry>
			<entry 
				open="false"
				select="false"
				text="Exact structure search" url="../database/searchStructure.action" >
			</entry>
			<entry 
				open="false"
				select="false"
				text="Substructure search" url="../database/searchSubStructure.action" >
			</entry>
			<entry 
				open="false"
				select="false"
				text="Similarity search" url="../database/searchSimilarStructure.action" >
			</entry>
			<entry 
				open="false"
				select="false"
				text="MCS search" url="../database/searchMCS.action" >
			</entry>
			<entry 
				open="false"
				select="false"
				text="Search by species" url="../database/searchBySpecies.action" >
			</entry>
		</entry>
		<entry 
			open="false"
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			text="Translation" url="../translation/Translation.action" >
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			text="Download" url="../showMenu.action?major=downloads" >
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			open="false"
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			text="Documentation" url="../showMenu.action?major=documentation" >
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			text="Contact" url="../Contact.action" >
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	</menu>


<body title="Structure information for structure 608">
	<structure_information id="608" flags="101101" back_text="New search" back_url="" 
		image_width="342" image_height="134" image_type="cfg">
 		<species count="13" remote="no">
			<taxon ncbi="197" name="Campylobacter jejuni">
				<entry database="bcsdb" id="21931"/>
				<entry database="bcsdb" id="141387"/>
				<entry database="carbbank" id="48922"/>
				<entry database="eurocarbdb(ebi)" id="1188"/>
			</taxon>
			<taxon ncbi="70433" name="Chionodraco myersi">
				<entry database="carbbank" id="46271"/>
				<entry database="cfg" id="carbGlipid_20758_D000"/>
				<entry database="eurocarbdb(ebi)" id="1188"/>
			</taxon>
			<taxon ncbi="7962" name="Cyprinus carpio">
				<entry database="carbbank" id="46271"/>
				<entry database="cfg" id="carbGlipid_20758_D000"/>
				<entry database="eurocarbdb(ebi)" id="1188"/>
			</taxon>
			<taxon ncbi="8049" name="Gadus morhua">
				<entry database="cfg" id="carbGlipid_20758_D000"/>
				<entry database="eurocarbdb(ebi)" id="1188"/>
			</taxon>
			<taxon ncbi="9031" name="Gallus gallus">
				<entry database="carbbank" id="42144"/>
				<entry database="carbbank" id="49493"/>
				<entry database="eurocarbdb(ebi)" id="1188"/>
				<entry database="glycosciences.de" id="764"/>
			</taxon>
			<taxon ncbi="9606" name="Homo sapiens">
				<entry database="carbbank" id="1281"/>
				<entry database="carbbank" id="1282"/>
				<entry database="carbbank" id="21985"/>
				<entry database="carbbank" id="22211"/>
				<entry database="carbbank" id="22660"/>
				<entry database="carbbank" id="26401"/>
				<entry database="carbbank" id="42144"/>
				<entry database="carbbank" id="44831"/>
				<entry database="carbbank" id="46992"/>
				<entry database="cfg" id="carbGlipid_20758_D000"/>
				<entry database="eurocarbdb(ebi)" id="1188"/>
				<entry database="glycosciences.de" id="764"/>
			</taxon>
			<taxon ncbi="10090" name="Mus musculus">
				<entry database="carbbank" id="22175"/>
				<entry database="carbbank" id="22642"/>
				<entry database="carbbank" id="25989"/>
				<entry database="carbbank" id="44180"/>
				<entry database="cfg" id="carbGlipid_20758_D000"/>
				<entry database="eurocarbdb(ebi)" id="1188"/>
				<entry database="glycosciences.de" id="764"/>
			</taxon>
			<taxon ncbi="8127" name="Oreochromis mossambicus">
				<entry database="cfg" id="carbGlipid_20758_D000"/>
				<entry database="eurocarbdb(ebi)" id="1188"/>
			</taxon>
			<taxon ncbi="10044" name="Phodopus sungorus">
				<entry database="cfg" id="carbGlipid_20758_D000"/>
				<entry database="eurocarbdb(ebi)" id="1188"/>
			</taxon>
			<taxon ncbi="10114" name="Rattus">
				<entry database="carbbank" id="21805"/>
				<entry database="carbbank" id="27251"/>
				<entry database="carbbank" id="33341"/>
				<entry database="carbbank" id="34816"/>
				<entry database="carbbank" id="35323"/>
				<entry database="carbbank" id="37345"/>
				<entry database="carbbank" id="42144"/>
				<entry database="carbbank" id="50215"/>
				<entry database="eurocarbdb(ebi)" id="1188"/>
				<entry database="glycosciences.de" id="764"/>
			</taxon>
			<taxon ncbi="58319" name="Scardinius erythrophthalmus">
				<entry database="carbbank" id="46271"/>
				<entry database="eurocarbdb(ebi)" id="1188"/>
			</taxon>
			<taxon ncbi="9823" name="Sus scrofa">
				<entry database="carbbank" id="46271"/>
				<entry database="cfg" id="carbGlipid_20758_D000"/>
				<entry database="eurocarbdb(ebi)" id="1188"/>
			</taxon>
			<taxon ncbi="40691" name="Trematomus lepidorhinus">
				<entry database="carbbank" id="46271"/>
				<entry database="cfg" id="carbGlipid_20758_D000"/>
				<entry database="eurocarbdb(ebi)" id="1188"/>
			</taxon>
		</species>
 		<aglycon count="4" remote="no">
			<aglyca name="Ceramide" reducing="yes">
				<entry database="carbbank" id="1281"/>
				<entry database="carbbank" id="1282"/>
				<entry database="carbbank" id="6966"/>
				<entry database="carbbank" id="8229"/>
				<entry database="carbbank" id="14418"/>
				<entry database="carbbank" id="14439"/>
				<entry database="carbbank" id="15502"/>
				<entry database="carbbank" id="16083"/>
				<entry database="carbbank" id="20712"/>
				<entry database="carbbank" id="21805"/>
				<entry database="carbbank" id="21985"/>
				<entry database="carbbank" id="22108"/>
				<entry database="carbbank" id="22175"/>
				<entry database="carbbank" id="22184"/>
				<entry database="carbbank" id="22211"/>
				<entry database="carbbank" id="22642"/>
				<entry database="carbbank" id="22660"/>
				<entry database="carbbank" id="23118"/>
				<entry database="carbbank" id="23864"/>
				<entry database="carbbank" id="25989"/>
				<entry database="carbbank" id="26401"/>
				<entry database="carbbank" id="27251"/>
				<entry database="carbbank" id="29481"/>
				<entry database="carbbank" id="32686"/>
				<entry database="carbbank" id="33341"/>
				<entry database="carbbank" id="33682"/>
				<entry database="carbbank" id="34108"/>
				<entry database="carbbank" id="34668"/>
				<entry database="carbbank" id="34816"/>
				<entry database="carbbank" id="35323"/>
				<entry database="carbbank" id="35397"/>
				<entry database="carbbank" id="35607"/>
				<entry database="carbbank" id="35647"/>
				<entry database="carbbank" id="36142"/>
				<entry database="carbbank" id="36641"/>
				<entry database="carbbank" id="37228"/>
				<entry database="carbbank" id="37345"/>
				<entry database="carbbank" id="39422"/>
				<entry database="carbbank" id="41888"/>
				<entry database="carbbank" id="42144"/>
				<entry database="carbbank" id="43499"/>
				<entry database="carbbank" id="44046"/>
				<entry database="carbbank" id="44073"/>
				<entry database="carbbank" id="44180"/>
				<entry database="carbbank" id="44831"/>
				<entry database="carbbank" id="46271"/>
				<entry database="carbbank" id="46992"/>
				<entry database="carbbank" id="48922"/>
				<entry database="carbbank" id="49493"/>
				<entry database="carbbank" id="50180"/>
				<entry database="carbbank" id="50215"/>
				<entry database="glycosciences.de" id="764"/>
			</aglyca>
			<aglyca name="Cer" reducing="yes">
				<entry database="bcsdb" id="141387"/>
				<entry database="kegg" id="G00112"/>
			</aglyca>
			<aglyca name=":C" reducing="yes">
				<entry database="cfg" id="carbGlipid_20758_D000"/>
			</aglyca>
			<aglyca name="sulfate" reducing="yes">
				<entry database="bcsdb" id="21931"/>
			</aglyca>
		</aglycon>
		<remote count="58">
			<entry database="bcsdb" id="21931"/>
			<entry database="bcsdb" id="141387"/>
			<entry database="carbbank" id="1281"/>
			<entry database="carbbank" id="1282"/>
			<entry database="carbbank" id="6966"/>
			<entry database="carbbank" id="8229"/>
			<entry database="carbbank" id="14418"/>
			<entry database="carbbank" id="14439"/>
			<entry database="carbbank" id="15502"/>
			<entry database="carbbank" id="16083"/>
			<entry database="carbbank" id="20712"/>
			<entry database="carbbank" id="21805"/>
			<entry database="carbbank" id="21985"/>
			<entry database="carbbank" id="22108"/>
			<entry database="carbbank" id="22175"/>
			<entry database="carbbank" id="22184"/>
			<entry database="carbbank" id="22211"/>
			<entry database="carbbank" id="22642"/>
			<entry database="carbbank" id="22660"/>
			<entry database="carbbank" id="23118"/>
			<entry database="carbbank" id="23864"/>
			<entry database="carbbank" id="25989"/>
			<entry database="carbbank" id="26401"/>
			<entry database="carbbank" id="27251"/>
			<entry database="carbbank" id="29481"/>
			<entry database="carbbank" id="32686"/>
			<entry database="carbbank" id="33341"/>
			<entry database="carbbank" id="33682"/>
			<entry database="carbbank" id="34108"/>
			<entry database="carbbank" id="34668"/>
			<entry database="carbbank" id="34816"/>
			<entry database="carbbank" id="35323"/>
			<entry database="carbbank" id="35397"/>
			<entry database="carbbank" id="35607"/>
			<entry database="carbbank" id="35647"/>
			<entry database="carbbank" id="36142"/>
			<entry database="carbbank" id="36641"/>
			<entry database="carbbank" id="37228"/>
			<entry database="carbbank" id="37345"/>
			<entry database="carbbank" id="39422"/>
			<entry database="carbbank" id="41888"/>
			<entry database="carbbank" id="42144"/>
			<entry database="carbbank" id="43499"/>
			<entry database="carbbank" id="44046"/>
			<entry database="carbbank" id="44073"/>
			<entry database="carbbank" id="44180"/>
			<entry database="carbbank" id="44831"/>
			<entry database="carbbank" id="46271"/>
			<entry database="carbbank" id="46992"/>
			<entry database="carbbank" id="48922"/>
			<entry database="carbbank" id="49493"/>
			<entry database="carbbank" id="50180"/>
			<entry database="carbbank" id="50215"/>
			<entry database="cfg" id="carbGlipid_20758_D000"/>
			<entry database="eurocarbdb(ebi)" id="1188"/>
			<entry database="glycosciences.de" id="764"/>
			<entry database="glycosciences.de" id="22459"/>
			<entry database="kegg" id="G00112"/>
		</remote>
		<expire count="1">
			<entry database="eurocarbdb(nibrt)" id="1188" date="2009-11-09"/>
		</expire>
		<deleted count="0">
		</deleted>
		<motifs count="1">
			<motif id="502" name="Glycosphingolipid Ganglio series" class="Glycosphingolipid"/>
		</motifs>
		<condenced>RES
1b:b-dglc-HEX-1:5
2b:b-dgal-HEX-1:5
3b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d
4s:n-acetyl
5b:b-dgal-HEX-1:5
6s:n-acetyl
7b:b-dgal-HEX-1:5
8b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d
9s:n-acetyl
10b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d
11s:n-acetyl
LIN
1:1o(4+1)2d
2:2o(3+2)3d
3:3d(5+1)4n
4:2o(4+1)5d
5:5d(2+1)6n
6:5o(3+1)7d
7:7o(3+2)8d
8:8d(5+1)9n
9:8o(8+2)10d
10:10d(5+1)11n
</condenced>
		<glycoct><![CDATA[<?xml version="1.0" encoding="UTF-8"?>
<sugar version="1.0">
  <residues>
    <basetype id="1" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dglc-HEX-1:5">
      <stemtype id="1" type="dglc" />
    </basetype>
    <basetype id="2" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dgal-HEX-1:5">
      <stemtype id="1" type="dgal" />
    </basetype>
    <basetype id="3" anomer="a" superclass="non" ringStart="2" ringEnd="6" name="a-dgro-dgal-NON-2:6|1:a|2:keto|3:d">
      <stemtype id="1" type="dgro" />
      <stemtype id="2" type="dgal" />
      <modification type="a" pos_one="1" />
      <modification type="keto" pos_one="2" />
      <modification type="d" pos_one="3" />
    </basetype>
    <substituent id="4" name="n-acetyl" />
    <basetype id="5" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dgal-HEX-1:5">
      <stemtype id="1" type="dgal" />
    </basetype>
    <substituent id="6" name="n-acetyl" />
    <basetype id="7" anomer="b" superclass="hex" ringStart="1" ringEnd="5" name="b-dgal-HEX-1:5">
      <stemtype id="1" type="dgal" />
    </basetype>
    <basetype id="8" anomer="a" superclass="non" ringStart="2" ringEnd="6" name="a-dgro-dgal-NON-2:6|1:a|2:keto|3:d">
      <stemtype id="1" type="dgro" />
      <stemtype id="2" type="dgal" />
      <modification type="a" pos_one="1" />
      <modification type="keto" pos_one="2" />
      <modification type="d" pos_one="3" />
    </basetype>
    <substituent id="9" name="n-acetyl" />
    <basetype id="10" anomer="a" superclass="non" ringStart="2" ringEnd="6" name="a-dgro-dgal-NON-2:6|1:a|2:keto|3:d">
      <stemtype id="1" type="dgro" />
      <stemtype id="2" type="dgal" />
      <modification type="a" pos_one="1" />
      <modification type="keto" pos_one="2" />
      <modification type="d" pos_one="3" />
    </basetype>
    <substituent id="11" name="n-acetyl" />
  </residues>
  <linkages>
    <connection id="1" parent="1" child="2">
      <linkage id="1" parentType="o" childType="d">
        <parent pos="4" />
        <child pos="1" />
      </linkage>
    </connection>
    <connection id="2" parent="2" child="3">
      <linkage id="2" parentType="o" childType="d">
        <parent pos="3" />
        <child pos="2" />
      </linkage>
    </connection>
    <connection id="3" parent="3" child="4">
      <linkage id="3" parentType="d" childType="n">
        <parent pos="5" />
        <child pos="1" />
      </linkage>
    </connection>
    <connection id="4" parent="2" child="5">
      <linkage id="4" parentType="o" childType="d">
        <parent pos="4" />
        <child pos="1" />
      </linkage>
    </connection>
    <connection id="5" parent="5" child="6">
      <linkage id="5" parentType="d" childType="n">
        <parent pos="2" />
        <child pos="1" />
      </linkage>
    </connection>
    <connection id="6" parent="5" child="7">
      <linkage id="6" parentType="o" childType="d">
        <parent pos="3" />
        <child pos="1" />
      </linkage>
    </connection>
    <connection id="7" parent="7" child="8">
      <linkage id="7" parentType="o" childType="d">
        <parent pos="3" />
        <child pos="2" />
      </linkage>
    </connection>
    <connection id="8" parent="8" child="9">
      <linkage id="8" parentType="d" childType="n">
        <parent pos="5" />
        <child pos="1" />
      </linkage>
    </connection>
    <connection id="9" parent="8" child="10">
      <linkage id="9" parentType="o" childType="d">
        <parent pos="8" />
        <child pos="2" />
      </linkage>
    </connection>
    <connection id="10" parent="10" child="11">
      <linkage id="10" parentType="d" childType="n">
        <parent pos="5" />
        <child pos="1" />
      </linkage>
    </connection>
  </linkages>
</sugar>

]]></glycoct>
		<glyde><![CDATA[<?xml version="1.0" encoding="UTF-8"?>
<GlydeII>
  <molecule subtype="glycan" id="From_GlycoCT_Translation">
    <residue subtype="base_type" partid="1" ref="http://www.monosaccharideDB.org/GLYDE-II.jsp?G=b-dglc-HEX-1:5" />
    <residue subtype="base_type" partid="2" ref="http://www.monosaccharideDB.org/GLYDE-II.jsp?G=b-dgal-HEX-1:5" />
    <residue subtype="base_type" partid="3" ref="http://www.monosaccharideDB.org/GLYDE-II.jsp?G=a-dgro-dgal-NON-2:6|1:a|2:keto|3:d" />
    <residue subtype="substituent" partid="4" ref="http://www.monosaccharideDB.org/GLYDE-II.jsp?G=n-acetyl" />
    <residue subtype="base_type" partid="5" ref="http://www.monosaccharideDB.org/GLYDE-II.jsp?G=b-dgal-HEX-1:5" />
    <residue subtype="substituent" partid="6" ref="http://www.monosaccharideDB.org/GLYDE-II.jsp?G=n-acetyl" />
    <residue subtype="base_type" partid="7" ref="http://www.monosaccharideDB.org/GLYDE-II.jsp?G=b-dgal-HEX-1:5" />
    <residue subtype="base_type" partid="8" ref="http://www.monosaccharideDB.org/GLYDE-II.jsp?G=a-dgro-dgal-NON-2:6|1:a|2:keto|3:d" />
    <residue subtype="substituent" partid="9" ref="http://www.monosaccharideDB.org/GLYDE-II.jsp?G=n-acetyl" />
    <residue subtype="base_type" partid="10" ref="http://www.monosaccharideDB.org/GLYDE-II.jsp?G=a-dgro-dgal-NON-2:6|1:a|2:keto|3:d" />
    <residue subtype="substituent" partid="11" ref="http://www.monosaccharideDB.org/GLYDE-II.jsp?G=n-acetyl" />
    <residue_link from="2" to="1">
      <atom_link from="C1" to="O4" from_replace="O1" bond_order="1" />
    </residue_link>
    <residue_link from="3" to="2">
      <atom_link from="C2" to="O3" from_replace="O2" bond_order="1" />
    </residue_link>
    <residue_link from="4" to="3">
      <atom_link from="N1H" to="C5" to_replace="O5" bond_order="1" />
    </residue_link>
    <residue_link from="5" to="2">
      <atom_link from="C1" to="O4" from_replace="O1" bond_order="1" />
    </residue_link>
    <residue_link from="6" to="5">
      <atom_link from="N1H" to="C2" to_replace="O2" bond_order="1" />
    </residue_link>
    <residue_link from="7" to="5">
      <atom_link from="C1" to="O3" from_replace="O1" bond_order="1" />
    </residue_link>
    <residue_link from="8" to="7">
      <atom_link from="C2" to="O3" from_replace="O2" bond_order="1" />
    </residue_link>
    <residue_link from="9" to="8">
      <atom_link from="N1H" to="C5" to_replace="O5" bond_order="1" />
    </residue_link>
    <residue_link from="10" to="8">
      <atom_link from="C2" to="O8" from_replace="O2" bond_order="1" />
    </residue_link>
    <residue_link from="11" to="10">
      <atom_link from="N1H" to="C5" to_replace="O5" bond_order="1" />
    </residue_link>
  </molecule>
</GlydeII>

]]></glyde>
		<encodings>
			<encoding name="GlycoCT{condensed}"/>
			<encoding name="GlycoCT{XML}"/>
			<encoding name="GlydeII"/>
		</encodings>
	</structure_information>
</body>
	<footer/>
</glycomedb_document>


